Our joint work “A Two-level Scheme for Quality Score Compression” with my (graduated) MSc student Ali Fotouhi (currently with University of Sherbrooke, Canada), Jan Voges and Jörn Osterman from University of Leipzig, Germany; has been accepted to Journal of Computational Biology. This work had been supported by the TUBITAK grant 117E293 grant.
My work with the title “An Ambiguous Coding Scheme for Selective Encryption of High-Entropy Volumes” is accepted to 17th International Symposium on Experimental Algorithms (SEA’18).
The proceedings volume of SEA 2018 is now officially published as volume 103 of LIPIcs and available at http://www.dagstuhl.de/dagpub/978-3-95977-070-5
The project entitled “Non-prefix free codes with applications” received a grant of amount 130K TL from the TUBITAK-1001 program for 18 months. Two graduate and two undergraduate students will be supported. Candidates with “excellent” knowledge of C/C++ and a strong interest in algorithms & data structures are encouraged to contact me by sharing their CVs.
Our paper entitled “Quality Assessment of High-Throughput DNA Sequencing Data via Range Analysis” with my student Ali Fotouhi and Mina Majidi is accepted to the International Work-Conference on Bioinformatics and Biomedical Engineering (IWBBIO) 2018 conference.
I have served as the opponent at the Ph.D. defense of Sukhpal Ghuman at Department of Computer Science, Aalto University, Helsinki, Finland on 15th of January, 2018.
Our paper entitled “A Two-level Scheme for Quality Score Compression”, has been accepted by the 2018 International Conference on Bioinformatics and Computational Biology (BICoB 2018).
I have visited Lab for Bioinformatics and Computational Genomics at School of Informatics, Computing, and Engineering, Indiana University Bloomington, IN, USA led by Prof. Cenk Sahinalp in August, 2017. I gave a talk entitled An Ambiguous Coding Scheme To Achieve Data Security with Less Encryption in Department of Computer Science colloquia seminers. Thanks a lot for the hospitality and the sincere atmosphere.